Sunday, October 16, 2022

understanding logarithms of Bayes factors...JJStatsPlot module output in Jamovi and ggstatsplot in R .

A Bayes factor is the ratio of the likelihood of one particular hypothesis to the likelihood of another. It can be interpreted as a measure of the strength of evidence in favor of one theory among two competing theories.

Bayes factor gives us a way to evaluate the data in favor of a null hypothesis,

 If the BF01 is 5 then it means the null hypothesis is 5 times as likely as the alternative hypothesis given the data. Conversely, if the BF01 is 1/5 then it means that the alternative hypothesis is 5 times as likely as the null hypothesis given the data.

N.B: BF10 = 1/BF01.

BF10 indicates the Bayes factor in favor of H1 over H0, whereas BF01 indicates the Bayes factor in favor of H0 over H1.

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If loge(BF01) is

then you have…

≥ 2

Extreme evidence for H0

1.5-  <2

Very strong evidence for H0

1-      <1.5

Strong evidence for H0

.5- <1

Moderate evidence for H0

0 - <.5

Anecdotal/weak evidence for H0

 

No evidence

Negative

Anecdotal evidence for H1

Moderate evidence for H1

Strong evidence for H1

Very strong evidence for H1

Extreme evidence for H1

 

 

 

 

 

 

 

 




loge (BF01) = -0.18 means that there is more evidence for the alternative hypothesis but it's anecdotal/weak.

 

 

 

 

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The default Cauchy is centered on 0 and has a scale factor "r" that determines the width. 

This scale factor happens to equal the interquartile range, such that, when r=0.707 for instance, 50% of the prior mass lies in the interval from -0.707 to +0.707.

JZS: Jeffreys-Zellner-Siow prior..
 

N.B. Any comments, explanations, additions or corrections are welcome

Update: I found a great video explaining similar results at yuzaR Data Science channel; from which I found this great explanation:



Resources:

https://ptfonseca.github.io/pcal/reference/bfactor_log_interpret.html

https://www.statology.org/bayes-factor/

https://www.statisticshowto.com/bayes-factor-definition/

https://forum.cogsci.nl/discussion/3236/setting-cauchy-prior-scaling-in-bayesian-t-test-use-related-effect-size

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